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Proteins

Proteins are an incredibly important part of any cell, and they carry out a number of functions such as support, storage and transport within the body. The monomers of proteins are called amino acids . An amino acid is an organic molecule that contains a carboxyl and an amino group, as well as a carbon side chain. The carbon side chain varies from one amino acid to the next, and is sometimes simply represented by the letter 'R' in a molecule's structural formula. [link] shows some examples of different amino acids.

Three amino acids: glycine, alanine and serine

Although each of these amino acids has the same basic structure, their side chains ('R' groups) are different. In the amino acid glycine, the side chain consists only of a hydrogen atom, while alanine has a methyl side chain. The 'R' group in serine is CH 2 - OH. Amongst other things, the side chains affect whether the amino acid is hydrophilic (attracted to water) or hydrophobic (repelled by water). If the side chain is polar , then the amino acid is hydrophilic, but if the side chain is non-polar then the amino acid is hydrophobic. Glycine and alanine both have non-polar side chains, while serine has a polar side chain.

Charged regions in an amino acid

In an amino acid, the amino group acts as a base because the nitrogen atom has a pair of unpaired electrons which it can use to bond to a hydrogen ion. The amino group therefore attracts the hydrogen ion from the carboxyl group, and ends up having a charge of +1. The carboxyl group from which the hydrogen ion has been taken then has a charge of -1. The amino acid glycine can therefore also be represented as shown in the figure below.

When two amino acid monomers are close together, they may be joined to each other by peptide bonds ( [link] ) to form a polypeptide chain. . The reaction is a condensation reaction. Polypeptides can vary in length from a few amino acids to a thousand or more. The polpeptide chains are then joined to each other in different ways to form a protein . It is the sequence of the amino acids in the polymer that gives a protein its particular properties.

The sequence of the amino acids in the chain is known as the protein's primary structure . As the chain grows in size, it begins to twist, curl and fold upon itself. The different parts of the polypeptide are held together by hydrogen bonds, which form between hydrogen atoms in one part of the chain and oxygen or nitrogen atoms in another part of the chain. This is known as the secondary structure of the protein. Sometimes, in this coiled helical structure, bonds may form between the side chains (R groups) of the amino acids. This results in even more irregular contortions of the protein. This is called the tertiary structure of the protein.

Two amino acids (glycine and alanine) combine to form part of a polypeptide chain. The amino acids are joined by a peptide bond between a carbon atom of one amino acid and a nitrogen atom of the other amino acid.

Interesting fact

There are twenty different amino acids that exist in nature. All cells, both plant and animal, build their proteins from only twenty amino acids. At first, this seems like a very small number, especially considering the huge number of different proteins that exist. However, if you consider that most proteins are made up of polypeptide chains that contain at least 100 amino acids, you will start to realise the endless possible combinations of amino acids that are available.

Questions & Answers

which quantity is measured in Watt?
Saara Reply
work
Absai
explain for me absai
Sboniso
is Power Not Work work is Measured In Joules it has Energy
Madman
thanks
Saara
Pleasure
Madman
what is galvanic cell ?
Oratile Reply
is an electrochemical cell that derives electrical energy from spontaneous redox reactions taking place within the cell.
Hope
how to understand alkane names
Sboniso Reply
suffix Ane in the IUPAC NAMING
Madman
What are hydrocarbons
Phelo Reply
are organic Compounds with only Carbon and Hydrogen Atoms
Madman
whats the difference between aldehydes and ketones
Angel Reply
definition of chain parent
Lea Reply
what is wave?
Agness Reply
when butane burns in an excess of oxygen ,the products are
Slay
CO2 and H2O
GARY
Carbon dioxide and Water...
Thato
what is hydrocarbon
Ntswaki Reply
Hydrocarbon is a compostion of mainy carbon and hydrogen
Tsion
hydrocarbon compound made up of carbon and hydrogen only
Thembelani
25 element of physics
musah Reply
an object will remain at rest or move at a constant velocity unless acted upon a net force
Lebogang Reply
thank you
Thabiso
law of inertia
Joan
an object resisting the change in velocity.
Thabiso
newton first law of motion
Tshepo
An object will remain at rest, unless an unbalanced force acts on it.
Anga
or uniform motion
Thato
What is a molecule
Thabiso Reply
a molecule is a simplest structure unite of an elements
Else
thank you
Thabiso
Plz remind me the 1st Newton's law
Thabiso
Define the term functinal group of an organic compound
Kamvelihle Reply
a single atom or a group of atoms which is responsible for the property and function of an organic compound
Shandre
thanks😊
Kamvelihle
What's the relationship between intensity and the current?
Lufuno Reply
yu are Spi.ke spanish hola ele
Rolamf
cómo se llama el video donde disquete salgo yo
Rolamf
The intensity doesn't effect the current.
Mosa
what does the word emitted mean?
Mwinga Reply
to be ejected or released
Khathutshelo
Ok thanks
Mwinga
Released
Mosa
what are the hooke laws
Tyriek Reply
what's that
Mosa

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Source:  OpenStax, Siyavula textbooks: grade 12 physical science. OpenStax CNX. Aug 03, 2011 Download for free at http://cnx.org/content/col11244/1.2
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