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Visualize how mRNA splicing happens by watching the process in action in this video .

Control of rna stability

Before the mRNA leaves the nucleus, it is given two protective "caps" that prevent the end of the strand from degrading during its journey. The 5' cap    , which is placed on the 5' end of the mRNA, is usually composed of a methylated guanosine triphosphate molecule (GTP). The poly-A tail    , which is attached to the 3' end, is usually composed of a series of adenine nucleotides. Once the RNA is transported to the cytoplasm, the length of time that the RNA resides there can be controlled. Each RNA molecule has a defined lifespan and decays at a specific rate. This rate of decay can influence how much protein is in the cell. If the decay rate is increased, the RNA will not exist in the cytoplasm as long, shortening the time for translation to occur. Conversely, if the rate of decay is decreased, the RNA molecule will reside in the cytoplasm longer and more protein can be translated. This rate of decay is referred to as the RNA stability. If the RNA is stable, it will be detected for longer periods of time in the cytoplasm.

Binding of proteins to the RNA can influence its stability. Proteins, called RNA-binding proteins , or RBPs, can bind to the regions of the RNA just upstream or downstream of the protein-coding region. These regions in the RNA that are not translated into protein are called the untranslated regions , or UTRs. They are not introns (those have been removed in the nucleus). Rather, these are regions that regulate mRNA localization, stability, and protein translation. The region just before the protein-coding region is called the 5' UTR    , whereas the region after the coding region is called the 3' UTR    ( [link] ). The binding of RBPs to these regions can increase or decrease the stability of an RNA molecule, depending on the specific RBP that binds.

In the mature RNA molecule, exons are spliced together between the 5' and 3' untranslated regions. A 5' cap is attached to the 5' untranslated region, and a poly-A tail is attached to the 3' untranslated region. RNA-binding proteins associate with the 5' and 3' untranslated regions.
The protein-coding region of mRNA is flanked by 5' and 3' untranslated regions (UTRs). The presence of RNA-binding proteins at the 5' or 3' UTR influences the stability of the RNA molecule.

Rna stability and micrornas

In addition to RBPs that bind to and control (increase or decrease) RNA stability, other elements called microRNAs can bind to the RNA molecule. These microRNAs , or miRNAs, are short RNA molecules that are only 21–24 nucleotides in length. The miRNAs are made in the nucleus as longer pre-miRNAs. These pre-miRNAs are chopped into mature miRNAs by a protein called dicer    . Like transcription factors and RBPs, mature miRNAs recognize a specific sequence and bind to the RNA; however, miRNAs also associate with a ribonucleoprotein complex called the RNA-induced silencing complex (RISC) . RISC binds along with the miRNA to degrade the target mRNA. Together, miRNAs and the RISC complex rapidly destroy the RNA molecule.

Section summary

Post-transcriptional control can occur at any stage after transcription, including RNA splicing, nuclear shuttling, and RNA stability. Once RNA is transcribed, it must be processed to create a mature RNA that is ready to be translated. This involves the removal of introns that do not code for protein. Spliceosomes bind to the signals that mark the exon/intron border to remove the introns and ligate the exons together. Once this occurs, the RNA is mature and can be translated. RNA is created and spliced in the nucleus, but needs to be transported to the cytoplasm to be translated. RNA is transported to the cytoplasm through the nuclear pore complex. Once the RNA is in the cytoplasm, the length of time it resides there before being degraded, called RNA stability, can also be altered to control the overall amount of protein that is synthesized. The RNA stability can be increased, leading to longer residency time in the cytoplasm, or decreased, leading to shortened time and less protein synthesis. RNA stability is controlled by RNA-binding proteins (RPBs) and microRNAs (miRNAs). These RPBs and miRNAs bind to the 5' UTR or the 3' UTR of the RNA to increase or decrease RNA stability. Depending on the RBP, the stability can be increased or decreased significantly; however, miRNAs always decrease stability and promote decay.

Questions & Answers

what is biology
Dada Reply
The scientific study of life.
juanita
the virus that causes mumps in humans is composed of a protein outer Shell containing a core of DNA
Daniel Reply
Basic science and applied science question about cancer
Joyce Reply
what are the importance of ATPs
Olatunji Reply
How can biology be studied from a microscopic approach to a global approach
Joyce Reply
The large central opening in the poriferan body is called
Chynna Reply
You go for a long walk on a hot day. Give an example of a way in which homeostasis keeps your body healthy.
Joyce Reply
You sweat.
juanita
sweating is your bodies way of keeping you from overheating.
juanita
Thank you
Joyce
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Neya Reply
biology is the study of life
IYANUYIMIKA
Biology is the study of Life
Brianna
is the branch of science which deals with the of living things.
Peter
what is metabolism
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Atta
pls come a again
Gyamfi
Describe the steps and results of reintroducing wolves to Yellowstone National Park.
Natalia Reply
tag and release wolves into Yellowstone. wolves eventually reproduce and the pack grows. as wolves hunt they cull the sick and weak prey. the carcass that is left provides food for other species (scavengers and insect.. etc). this heals the circle of life and contributes to the biodiversity...
Will
before you know it species that are critical to the eco system return. having apex predators is crucial to an ecosystem... it helps run the deer and elk , etc around.
Will
example: there was a species of shrub/ plant that grows along river banks that moose love to eat.. the moose have no predator so they decimate that food source which also helps prevent erosion. when the wolves were reintroduced this changed. oddly enough this plant species started to repopulate in
Will
the areas where wolf feces sat and decayed
Will
which of the following statements about the parts of an egg are false?
Israel Reply
Monotremes include...?
Israel
medicinal plants including microbs
vijay Reply
,medicinal plants including microbes
vijay
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study of living organisms...
R0se
study of plants and animals
Divine
what is abiotic and biotic factors?
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Source:  OpenStax, Biology. OpenStax CNX. Feb 29, 2016 Download for free at http://cnx.org/content/col11448/1.10
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